U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC110720878 ankyrin repeat-containing protein ITN1-like [ Chenopodium quinoa (quinoa) ]

Gene ID: 110720878, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
LOC110720878
Gene description
ankyrin repeat-containing protein ITN1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Chenopodium quinoa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC110720878 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM168347v1 (GCF_001683475.1) Unplaced Scaffold NW_018742577.1 (1198961..1206606)

NW_018742577.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110720680 Neighboring gene uncharacterized LOC110720741 Neighboring gene mannose/glucose-specific lectin-like Neighboring gene putative BPI/LBP family protein At1g04970 Neighboring gene uncharacterized LOC110720880

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_018742577 Unplaced Scaffold Reference ASM168347v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein phosphatase 1 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ankyrin repeat-containing protein ITN1-like; protein ACCELERATED CELL DEATH 6-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Chenopodium quinoa Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM168347v1 Primary Assembly

Genomic

  1. NW_018742577.1 Reference ASM168347v1 Primary Assembly

    Range
    1198961..1206606
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021899956.1 → XP_021755648.1  protein ACCELERATED CELL DEATH 6-like isoform X2

    Conserved Domains (3) summary
    cd00204
    Location:166 → 273
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:26 → 57
    ANK; ANK repeat [structural motif]
    pfam13962
    Location:305 → 410
    PGG; Domain of unknown function

  2. XM_021899955.1 → XP_021755647.1  ankyrin repeat-containing protein ITN1-like isoform X1

    Conserved Domains (2) summary
    cd00204
    Location:188 → 301
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam13962
    Location:333 → 438
    PGG; Domain of unknown function
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases