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LOC110438926 NACHT, LRR and PYD domains-containing protein 3 [ Danio rerio (zebrafish) ]

Gene ID: 110438926, updated on 12-Sep-2024

Summary

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Gene symbol
LOC110438926
Gene description
NACHT, LRR and PYD domains-containing protein 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
all
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Genomic context

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See LOC110438926 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (1341311..1378033, complement)

Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene glutamate receptor ionotropic, NMDA 2B Neighboring gene transmembrane protein 106C Neighboring gene uncharacterized LOC110438934 Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 Neighboring gene WW domain binding protein 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007114.7 Chromosome 3 Reference GRCz11 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
NACHT, LRR and PYD domains-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007114.7 Reference GRCz11 Primary Assembly

    Range
    1341311..1378033 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068218404.1 → XP_068074505.1  NACHT, LRR and PYD domains-containing protein 3 isoform X2

  2. XM_068218399.1 → XP_068074500.1  NACHT, LRR and PYD domains-containing protein 3 isoform X1

Nucleotide Protein Strain
Heading Accession and Version

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