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LOC110438630 protein piccolo-like [ Danio rerio (zebrafish) ]

Gene ID: 110438630, updated on 12-Sep-2024

Summary

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Gene symbol
LOC110438630
Gene description
protein piccolo-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Annotation information
Annotation category: only annotated on alternate loci in reference assembly
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Genomic context

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See LOC110438630 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 4 Unlocalized Scaffold (ALT_DRER_TU_1) NW_018394552.1 (132954..142914)

NW_018394552.1Genomic Context describing neighboring genes Neighboring gene sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa Neighboring gene piccolo presynaptic cytomatrix protein a Neighboring gene serine/threonine-protein kinase pim-1-like Neighboring gene transfer RNA tyrosine (anticodon GUA) Neighboring gene ankyrin repeat domain 16 Neighboring gene GDP dissociation inhibitor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018394552.1 Chromosome 4 Reference GRCz11 ALT_DRER_TU_1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
protein piccolo-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394552.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    132954..142914
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021471541.2 → XP_021327216.1  protein piccolo-like

    UniProtKB/TrEMBL
    A0A8M9PY27
    Conserved Domains (1) summary
    cl14603
    Location:126 → 263
    C2; C2 domain
Nucleotide Protein Strain
Heading Accession and Version

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