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LOC110008559 cytochrome P450 86B1-like [ Amborella trichopoda ]

Gene ID: 110008559, updated on 21-Dec-2023

Summary

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Gene symbol
LOC110008559
Gene description
cytochrome P450 86B1-like
Locus tag
AMTR_s00004p00043150
Gene type
protein coding
RefSeq status
MODEL
Organism
Amborella trichopoda
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella
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Genomic context

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See LOC110008559 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current AMTR1.0 (GCF_000471905.2) Unplaced Scaffold NW_006494789.1 (371444..376014)

NW_006494789.1Genomic Context describing neighboring genes Neighboring gene protein MON2 homolog Neighboring gene late embryogenesis abundant protein D-34 Neighboring gene methylmalonyl-CoA epimerase, mitochondrial Neighboring gene ferredoxin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006494789.1 Unplaced Scaffold Reference AMTR1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytochrome P450 86B1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Amborella trichopoda Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AMTR1.0 Primary Assembly

Genomic

  1. NW_006494789.1 Reference AMTR1.0 Primary Assembly

    Range
    371444..376014
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020676591.1 → XP_020532250.1  cytochrome P450 86B1-like

    Conserved Domains (1) summary
    PLN03195
    Location:17 → 488
    PLN03195; fatty acid omega-hydroxylase; Provisional
Nucleotide Protein
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