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LOC108695192 uncharacterized LOC108695192 [ Atta colombica ]

Gene ID: 108695192, updated on 1-Oct-2024

Summary

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Gene symbol
LOC108695192
Gene description
uncharacterized LOC108695192
Locus tag
ALC53_02734
Gene type
protein coding
RefSeq status
MODEL
Organism
Atta colombica
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta
Orthologs
honey bee all
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Genomic context

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See LOC108695192 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Acol1.0 (GCF_001594045.1) Unplaced Scaffold NW_017259213.1 (768636..780888)

NW_017259213.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108695127 Neighboring gene venom protease-like Neighboring gene annexin B9-like Neighboring gene muscle M-line assembly protein unc-89-like Neighboring gene integrator complex subunit 14 Neighboring gene eukaryotic translation initiation factor 6 Neighboring gene Regulator of chromosome condensation 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017259213.1 Unplaced Scaffold Reference Acol1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyroglutamyl-peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC108695192
Names
Pyroglutamyl-peptidase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Atta colombica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Acol1.0

Genomic

  1. NW_017259213.1 Reference Acol1.0

    Range
    768636..780888
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018204976.1 → XP_018060465.1  uncharacterized protein LOC108695192 isoform X3

  2. XM_018204974.1 → XP_018060463.1  uncharacterized protein LOC108695192 isoform X1

  3. XM_018204975.1 → XP_018060464.1  uncharacterized protein LOC108695192 isoform X2

    UniProtKB/TrEMBL
    A0A195BP14
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases