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Snord14c small nucleolar RNA, C/D box 14C [ Mus musculus (house mouse) ]

Gene ID: 108637, updated on 17-Aug-2024

Summary

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Official Symbol
Snord14cprovided by MGI
Official Full Name
small nucleolar RNA, C/D box 14Cprovided by MGI
Primary source
MGI:MGI:97971
See related
Ensembl:ENSMUSG00000119805 AllianceGenome:MGI:97971
Gene type
snoRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
U14; Rnu14; Gm23107
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Genomic context

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See Snord14c in Genome Data Viewer
Location:
9 A5.1; 9 21.55 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (40714879..40714965)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (40803583..40803669)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene CXADR-like membrane protein Neighboring gene predicted gene, 48293 Neighboring gene predicted gene 16096 Neighboring gene STARR-seq mESC enhancer starr_23871 Neighboring gene STARR-seq mESC enhancer starr_23872 Neighboring gene small nucleolar RNA, C/D box 14D Neighboring gene small nucleolar RNA, C/D box 14E Neighboring gene heat shock protein 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Determination of the nucleotide sequences in mouse U14 small nuclear RNA and 18S ribosomal RNA responsible for in vitro intermolecular base-pairing. Shanab GM, et al. Eur J Biochem, 1992 Jun 1. PMID 1375913
  2. Mouse U14 snRNA is a processed intron of the cognate hsc70 heat shock pre-messenger RNA. Leverette RD, et al. Cell, 1992 Dec 24. PMID 1282084
  3. Small nucleolar RNAs. Eliceiri GL. Cell Mol Life Sci, 1999 Oct 1. PMID 11213258, Free PMC Article
  4. Processing of U14 small nucleolar RNA from three different introns of the mouse 70-kDa-cognate-heat-shock-protein pre-messenger RNA. Barbhaiya H, et al. Eur J Biochem, 1994 Dec 15. PMID 7813466
  5. Mouse U14 snRNA is encoded in an intron of the mouse cognate hsc70 heat shock gene. Liu J, et al. Nucleic Acids Res, 1990 Nov 25. PMID 2251119, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Other Names

  • U14 small nuclear RNA
  • U14 snRNA

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_028276.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC158355
    Related
    ENSMUST00000083424.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    40714879..40714965
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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