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Trnav-aac3 transfer RNA valine (anticodon AAC) 3 [ Rattus norvegicus (Norway rat) ]

Gene ID: 108351149, updated on 17-Aug-2024

Summary

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Symbol
Trnav-aac3provided by RGD
Full Name
transfer RNA valine (anticodon AAC) 3provided by RGD
Primary source
RGD:11510646
See related
AllianceGenome:RGD:11510646
Gene type
tRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104).
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Genomic context

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See Trnav-aac3 in Genome Data Viewer
Location:
5q36
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (156969133..156969204, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (151685931..151686002, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (157898213..157898284, complement)

Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene MRT4 homolog, ribosome maturation factor Neighboring gene ER membrane protein complex subunit 1 Neighboring gene ubiquitin protein ligase E3 component n-recognin 4 Neighboring gene intermediate filament family orphan 2 Neighboring gene uncharacterized LOC134479043 Neighboring gene microRNA 6215

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086023.1 Reference GRCr8

    Range
    156969133..156969204 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
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