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Trnaa-agc5 transfer RNA alanine (anticodon AGC) 5 [ Rattus norvegicus (Norway rat) ]

Gene ID: 108350891, updated on 17-Aug-2024

Summary

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Symbol
Trnaa-agc5provided by RGD
Full Name
transfer RNA alanine (anticodon AGC) 5provided by RGD
Primary source
RGD:11488957
See related
AllianceGenome:RGD:11488957
Gene type
tRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104).
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Genomic context

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See Trnaa-agc5 in Genome Data Viewer
Location:
4q42
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (157282439..157282505)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (155610386..155610452)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (155196677..155196751)

Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene polyhomeotic homolog 1 Neighboring gene alpha-ketoglutarate dehydrogenase component 4-like Neighboring gene small ubiquitin-related modifier 1-like Neighboring gene ribosomal modification protein rimK-like family member B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086022.1 Reference GRCr8

    Range
    157282439..157282505
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    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version