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Lcn15l1 lipocalin-15 like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 108350339, updated on 9-Dec-2024

Summary

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Symbol
Lcn15l1provided by RGD
Full Name
lipocalin-15 like 1provided by RGD
Primary source
RGD:11355973
See related
EnsemblRapid:ENSRNOG00000062998 AllianceGenome:RGD:11355973
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable small molecule binding activity. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
human all
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Genomic context

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See Lcn15l1 in Genome Data Viewer
Location:
3p13
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (29014008..29018833)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (8616062..8620717)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (3243652..3248457)

Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene progestagen associated endometrial protein like 1 Neighboring gene odorant binding protein 2B like 1 Neighboring gene odorant binding protein 2B Neighboring gene parkin RBR E3 ubiquitin protein ligase like 1 Neighboring gene eukaryotic translation initiation factor 4E, pseudogene 4 Neighboring gene glycosyltransferase 6 domain containing 1 Neighboring gene lipocalin 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables small molecule binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
beta-lactoglobulin; lipocalin-15 like 1
Names
lipocalin-15

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001431845.1 → NP_001418774.1  lipocalin-15 like 1 precursor

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000003
    UniProtKB/TrEMBL
    A0A8I5ZYR2

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086021.1 Reference GRCr8

    Range
    29014008..29018833
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063284811.1 → XP_063140881.1  beta-lactoglobulin

    Related
    ENSRNOP00000085211.1, ENSRNOT00000096561.2
Nucleotide Protein Strain
Heading Accession and Version

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