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Sec61gl2 Sec61 translocon subunit gamma like 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 108348617, updated on 14-Nov-2024

Summary

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Official Symbol
Sec61gl2provided by RGD
Official Full Name
Sec61 translocon subunit gamma like 2provided by RGD
Primary source
RGD:11394977
See related
EnsemblRapid:ENSRNOG00000060417 AllianceGenome:RGD:11394977
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
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Genomic context

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See Sec61gl2 in Genome Data Viewer
Location:
17q12.3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 17 NC_086035.1 (80547563..80547769, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 17 NC_051352.1 (75638449..75638655, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 17 NC_005116.4 (79829305..79829511, complement)

Chromosome 17 - NC_086035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103694135 Neighboring gene uncharacterized LOC134482608 Neighboring gene MINDY lysine 48 deubiquitinase 3 Neighboring gene U7 small nuclear RNA Neighboring gene uncharacterized LOC102548534

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables protein transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in post-translational protein targeting to membrane, translocation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of Ssh1 translocon complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
protein transport protein Sec61 subunit gamma-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086035.1 Reference GRCr8

    Range
    80547563..80547769 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039096455.1 → XP_038952383.1  protein transport protein Sec61 subunit gamma-like

    UniProtKB/TrEMBL
    A0A0G2K7E7
    Related
    ENSRNOP00000074173.1, ENSRNOT00000085909.3
    Conserved Domains (1) summary
    cl00481
    Location:12 → 68
    SecE; SecE/Sec61-gamma subunits of protein translocation complex
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases