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Gm46815 predicted gene, 46815 [ Mus musculus (house mouse) ]

Gene ID: 108168885, updated on 22-Oct-2024

Summary

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Official Symbol
Gm46815provided by MGI
Official Full Name
predicted gene, 46815provided by MGI
Primary source
MGI:MGI:5826452
See related
Ensembl:ENSMUSG00000120720 AllianceGenome:MGI:5826452
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm46815 in Genome Data Viewer
Location:
3 F2.1; 3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (95833064..95836347, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (95925875..95929025, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA C920021L13 gene Neighboring gene cDNA sequence BC028528 Neighboring gene circadian associated repressor of transcription Neighboring gene STARR-positive B cell enhancer ABC_E2673 Neighboring gene aph1 homolog A, gamma secretase subunit Neighboring gene carbonic anhydrase 14 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:95732686-95732932 Neighboring gene acidic nuclear phosphoprotein 32 family member E Neighboring gene STARR-seq mESC enhancer starr_08401 Neighboring gene STARR-positive B cell enhancer ABC_E9220 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:95776851-95777077 Neighboring gene ferritin light chain 2 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_176009.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC092855
    Related
    ENSMUST00000328368.1

  2. NR_176010.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC092855
    Related
    ENSMUST00000328371.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    95833064..95836347 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version