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Gm46416 predicted gene, 46416 [ Mus musculus (house mouse) ]

Gene ID: 108168085, updated on 17-Aug-2024

Summary

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Official Symbol
Gm46416provided by MGI
Official Full Name
predicted gene, 46416provided by MGI
Primary source
MGI:MGI:5826053
See related
AllianceGenome:MGI:5826053
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Ubiquitous expression in ovary adult (RPKM 14.0), spleen adult (RPKM 12.6) and 28 other tissues See more
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Genomic context

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See Gm46416 in Genome Data Viewer
Location:
13 B1; 13
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (55683808..55696672)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (55535995..55548859)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene PDZ and LIM domain 7 Neighboring gene microRNA 6945 Neighboring gene STARR-positive B cell enhancer ABC_E10796 Neighboring gene docking protein 3 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:55637802-55638169 Neighboring gene DEAD box helicase 41 Neighboring gene family with sequence similarity 193, member B Neighboring gene predicted gene, 31364 Neighboring gene transmembrane p24 trafficking protein 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    55683808..55696672
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001780952.2 RNA Sequence

  2. XR_003950651.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version