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LOC107984787 uncharacterized LOC107984787 [ Homo sapiens (human) ]

Gene ID: 107984787, updated on 10-Dec-2024

Summary

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Gene symbol
LOC107984787
Gene description
uncharacterized LOC107984787
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107984787 in Genome Data Viewer
Location:
15q11.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (23955036..23973575)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (21689454..21707656)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 741, pseudogene Neighboring gene uncharacterized LOC124903447 Neighboring gene ReSE screen-validated silencer GRCh37_chr15:24172104-24172318 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:24199761-24200274 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:24200275-24200786 Neighboring gene Prader-Willi region non-protein coding RNA 4 Neighboring gene uncharacterized LOC105370733 Neighboring gene uncharacterized LOC105370732 Neighboring gene Prader-Willi region non-protein coding RNA 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    23955036..23973575
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007064535.1 RNA Sequence

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_021160017.1 Reference GRCh38.p14 PATCHES

    Range
    4859544..4921407
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001751441.1 RNA Sequence

  2. XR_007069207.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    21689454..21707656
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007085431.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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