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LOC107774014 125 kDa kinesin-related protein [ Nicotiana tabacum (common tobacco) ]

Gene ID: 107774014, updated on 12-Dec-2024

Summary

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Gene symbol
LOC107774014
Gene description
125 kDa kinesin-related protein
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nicotiana tabacum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Also known as
KIN5C; TKRP125
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Genomic context

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See LOC107774014 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2024_11 current Ntab-TN90 (GCF_000715135.1) Unplaced Scaffold NW_015899007.1 (888..10151)

NW_015899007.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At4g21065-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015899007 Unplaced Scaffold Reference Ntab-TN90 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TKRP125, a kinesin-related protein involved in the centrosome-independent organization of the cytokinetic apparatus in tobacco BY-2 cells. Asada T, et al. J Cell Sci, 1997 Jan. PMID 9044048
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables plus-end-directed microtubule motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule-based movement IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic spindle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spindle elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitotic spindle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kinesin-like protein KIN-5C
Names
Kinesin-like protein KIN-5C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001325174.1 → NP_001312103.1  kinesin-like protein KIN-5C

    Status: PROVISIONAL

    Source sequence(s)
    D83711
    UniProtKB/Swiss-Prot
    O23826
    UniProtKB/TrEMBL
    A0A1S3YAA1
    Conserved Domains (2) summary
    cd01364
    Location:7 → 364
    KISc_BimC_Eg5; Kinesin motor domain, BimC/Eg5 spindle pole proteins
    pfam00225
    Location:15 → 355
    Kinesin; Kinesin motor domain

RefSeqs of Annotated Genomes: GCF_000715135.1-RS_2024_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ntab-TN90 Primary Assembly

Genomic

  1. NW_015899007.1 Reference Ntab-TN90 Primary Assembly

    Range
    888..10151
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016593456.1 → XP_016448942.1  kinesin-like protein KIN-5C isoform X1

    UniProtKB/TrEMBL
    A0A1S3YAA1, A0A1S3YAC0
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O23826.1 GenPept UniProtKB/Swiss-Prot:O23826

Gene LinkOut

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