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LOC107359117 choline-phosphate cytidylyltransferase A [ Tetranychus urticae (two-spotted spider mite) ]

Gene ID: 107359117, updated on 22-Oct-2023

Summary

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Gene symbol
LOC107359117
Gene description
choline-phosphate cytidylyltransferase A
Gene type
protein coding
RefSeq status
MODEL
Organism
Tetranychus urticae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Acariformes; Trombidiformes; Prostigmata; Eleutherengona; Raphignathae; Tetranychoidea; Tetranychidae; Tetranychus
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Genomic context

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See LOC107359117 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM23943v1 (GCF_000239435.1) Unplaced Scaffold NW_015449932.1 (4699103..4700697, complement)

NW_015449932.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112540005 Neighboring gene uncharacterized LOC107359115 Neighboring gene DEP domain-containing protein DDB_G0279099 Neighboring gene peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015449932 Unplaced Scaffold Reference ASM23943v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline-phosphate cytidylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylcholine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CDP-choline pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline-phosphate cytidylyltransferase A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tetranychus urticae Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM23943v1 Primary Assembly

Genomic

  1. NW_015449932.1 Reference ASM23943v1 Primary Assembly

    Range
    4699103..4700697 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015925566.2 → XP_015781052.1  choline-phosphate cytidylyltransferase A

    UniProtKB/TrEMBL
    T1K0S7
    Conserved Domains (1) summary
    cd02174
    Location:72 → 221
    CCT; CTP:phosphocholine cytidylyltransferase
Nucleotide Protein Strain
Heading Accession and Version

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