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Pentatricopeptide repeat (PPR-like) superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 10723133, updated on 18-Sep-2024

Summary

Official Full Name
Pentatricopeptide repeat (PPR-like) superfamily protein
Primary source
TAIR:AT4G19890
Locus tag
AT4G19890
See related
Araport:AT4G19890
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (10786557..10789070, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene Glutathione S-transferase family protein Neighboring gene alpha 1,4-glycosyltransferase family protein Neighboring gene miscRNA

General protein information

Preferred Names
Pentatricopeptide repeat (PPR-like) superfamily protein
NP_001190774.1
  • Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    10786557..10789070 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001203845.2NP_001190774.1  Pentatricopeptide repeat (PPR-like) superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190774.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P0C8Q3, Q9SNA8
    UniProtKB/TrEMBL
    A0A178V258, A0A5S9XU43
    Conserved Domains (2) summary
    PLN03218
    Location:282601
    PLN03218; maturation of RBCL 1; Provisional
    sd00004
    Location:502527
    PPR; PPR repeat [structural motif]