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SPHK2 Diacylglycerol kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 10723114, updated on 18-Sep-2024

Summary

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Official Symbol
SPHK2
Official Full Name
Diacylglycerol kinase family protein
Primary source
TAIR:AT4G21534
Locus tag
AT4G21534
See related
Araport:AT4G21534
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
sphingosine kinase 2
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Genomic context

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See SPHK2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
11
Sequence:
Chromosome: 4; NC_003075.7 (11456126..11459223)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene F-box family protein Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene sphingosine kinase 1 Neighboring gene ncRNA Neighboring gene VP1/ABI3-like 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phosphatidic acid binds and stimulates Arabidopsis sphingosine kinases. Guo L, et al. J Biol Chem, 2011 Apr 15. PMID 21330371, Free PMC Article
  2. Connections between sphingosine kinase and phospholipase D in the abscisic acid signaling pathway in Arabidopsis. Guo L, et al. J Biol Chem, 2012 Mar 9. PMID 22275366, Free PMC Article
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables D-erythro-sphingosine kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables phosphatidic acid binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables sphingosine kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to abscisic acid stimulus IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within response to abscisic acid IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in sphingolipid metabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in sphingolipid metabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in plant-type vacuole membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Diacylglycerol kinase family protein
NP_001320021.1
  • Diacylglycerol kinase family protein; FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: sphingosine kinase 1 (TAIR:AT4G21540.1).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    11456126..11459223
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001341495.1 → NP_001320021.1  Diacylglycerol kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F2Y4A3
    UniProtKB/TrEMBL
    A0A178UW59

  2. NM_001203858.2 → NP_001190787.1  Diacylglycerol kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190787.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F2Y4A3
    UniProtKB/TrEMBL
    A0A178UW59
    Conserved Domains (2) summary
    PLN02958
    Location:1 → 480
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase
    pfam00781
    Location:115 → 249
    DAGK_cat; Diacylglycerol kinase catalytic domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F2Y4A3.1

Gene LinkOut

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