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pentatricopeptide (PPR) repeat-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 10723105, updated on 18-Sep-2024

Summary

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Official Full Name
pentatricopeptide (PPR) repeat-containing protein
Primary source
TAIR:AT1G62914
Locus tag
AT1G62914
See related
Araport:AT1G62914
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (23301315..23303162)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene uncharacterized protein Neighboring gene proteasome maturation factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
pentatricopeptide (PPR) repeat-containing protein
NP_001185295.1
  • pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G63400.1).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    23301315..23303162
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001198366.2 → NP_001185295.1  pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001185295.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LQ15
    Conserved Domains (3) summary
    PLN03218
    Location:141 → 475
    PLN03218; maturation of RBCL 1; Provisional
    sd00004
    Location:325 → 352
    PPR; PPR repeat [structural motif]
    pfam13041
    Location:461 → 510
    PPR_2; PPR repeat family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LQ15.1

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