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methyltransferase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 10723039, updated on 18-Sep-2024

Summary

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Official Full Name
methyltransferase
Primary source
TAIR:AT5G10605
Locus tag
AT5G10605
See related
Araport:AT5G10605
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (3351196..3353392, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene plant/protein (Protein of unknown function, DUF599) Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene cytochrome P450, family 81, subfamily K, polypeptide 2 Neighboring gene cytochrome P450, family 81, subfamily K, polypeptide 1 Neighboring gene methyltransferase Neighboring gene flowering-promoting factor-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
methyltransferase
NP_001190281.1
  • methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: SPOUT methyltransferase, predicted (InterPro:IPR003742); BEST Arabidopsis thaliana protein match is: methyltransferases (TAIR:AT5G10620.1).
NP_001318529.1
  • methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: SPOUT methyltransferase, predicted (InterPro:IPR003742); BEST Arabidopsis thaliana protein match is: methyltransferases (TAIR:AT5G10620.1).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    3351196..3353392 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001343123.1 → NP_001318529.1  methyltransferase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4KI79

  2. NM_001203352.1 → NP_001190281.1  methyltransferase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190281.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4KI79
    Conserved Domains (1) summary
    cl00679
    Location:15 → 56
    SPOUT_MTase; Predicted SPOUT methyltransferase
Nucleotide Protein
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