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LOC106883302 putative ankyrin repeat protein RBE_0317 [ Octopus bimaculoides (California two-spot octopus) ]

Gene ID: 106883302, updated on 23-Nov-2023

Summary

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Gene symbol
LOC106883302
Gene description
putative ankyrin repeat protein RBE_0317
Locus tag
OCBIM_22030648mg
See related
EnsemblRapid:LOC106883302
Gene type
protein coding
RefSeq status
MODEL
Organism
Octopus bimaculoides
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Cephalopoda; Coleoidea; Octopodiformes; Octopoda; Incirrata; Octopodidae; Octopus
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Genomic context

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See LOC106883302 in Genome Data Viewer
Location:
chromosome: 30
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_01 current ASM119413v2 (GCF_001194135.2) 30 NC_069010.1 (9570892..9580643, complement)
100 previous assembly Octopus_bimaculoides_v2_0 (GCF_001194135.1) Unplaced Scaffold NW_014655318.1 (7054..16379, complement)

Chromosome 30 - NC_069010.1Genomic Context describing neighboring genes Neighboring gene gamma-aminobutyric acid receptor alpha-like Neighboring gene uncharacterized LOC128251300 Neighboring gene uncharacterized LOC106879217 Neighboring gene uncharacterized LOC106882249

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative ankyrin repeat protein RBE_0317

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001194135.2-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM119413v2 Primary Assembly

Genomic

  1. NC_069010.1 Reference ASM119413v2 Primary Assembly

    Range
    9570892..9580643 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052978134.1 → XP_052834094.1  putative ankyrin repeat protein RBE_0317

    Related
    XP_052834094.1, XM_052978134.1
Nucleotide Protein
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