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LOC106882807 uncharacterized LOC106882807 [ Octopus bimaculoides (California two-spot octopus) ]

Gene ID: 106882807, updated on 23-Nov-2023

Summary

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Gene symbol
LOC106882807
Gene description
uncharacterized LOC106882807
Locus tag
OCBIM_22016506mg
See related
EnsemblRapid:LOC106882807
Gene type
protein coding
RefSeq status
MODEL
Organism
Octopus bimaculoides
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Cephalopoda; Coleoidea; Octopodiformes; Octopoda; Incirrata; Octopodidae; Octopus
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Genomic context

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See LOC106882807 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_01 current ASM119413v2 (GCF_001194135.2) 4 NC_068984.1 (23591407..23603042)
100 previous assembly Octopus_bimaculoides_v2_0 (GCF_001194135.1) Unplaced Scaffold NW_014752432.1 (53471..65329, complement)

Chromosome 4 - NC_068984.1Genomic Context describing neighboring genes Neighboring gene nodal homolog Neighboring gene charged multivesicular body protein 6-A Neighboring gene nucleosome-remodeling factor subunit BPTF Neighboring gene aminoacyl tRNA synthase complex-interacting multifunctional protein 2 Neighboring gene histamine H2 receptor-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC106882807

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001194135.2-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM119413v2 Primary Assembly

Genomic

  1. NC_068984.1 Reference ASM119413v2 Primary Assembly

    Range
    23591407..23603042
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014933589.2 → XP_014789075.1  uncharacterized protein LOC106882807

    UniProtKB/TrEMBL
    A0A0L8FK63
    Related
    XP_014789075.1, XM_014933589.2
    Conserved Domains (1) summary
    cl08475
    Location:44 → 233
    PIG-X; PIG-X / PBN1
Nucleotide Protein
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Gene LinkOut

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