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LOC106882805 nodal homolog [ Octopus bimaculoides (California two-spot octopus) ]

Gene ID: 106882805, updated on 3-Dec-2024

Summary

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Gene symbol
LOC106882805
Gene description
nodal homolog
Locus tag
OCBIM_22016509mg
See related
EnsemblRapid:LOC106882805
Gene type
protein coding
RefSeq status
MODEL
Organism
Octopus bimaculoides
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Cephalopoda; Coleoidea; Octopodiformes; Octopoda; Incirrata; Octopodidae; Octopus
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Genomic context

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See LOC106882805 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_01 current ASM119413v2 (GCF_001194135.2) 4 NC_068984.1 (23557154..23565797)
100 previous assembly Octopus_bimaculoides_v2_0 (GCF_001194135.1) Unplaced Scaffold NW_014752432.1 (90722..94468, complement)

Chromosome 4 - NC_068984.1Genomic Context describing neighboring genes Neighboring gene chitobiosyldiphosphodolichol beta-mannosyltransferase Neighboring gene uncharacterized LOC106882809 Neighboring gene charged multivesicular body protein 6-A Neighboring gene uncharacterized LOC106882807 Neighboring gene nucleosome-remodeling factor subunit BPTF

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables type I activin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in SMAD protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nodal homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001194135.2-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM119413v2 Primary Assembly

Genomic

  1. NC_068984.1 Reference ASM119413v2 Primary Assembly

    Range
    23557154..23565797
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014933587.2 → XP_014789073.2  nodal homolog

    UniProtKB/TrEMBL
    A0A0L8FK69
    Related
    XP_014789073.2, XM_014933587.2
Nucleotide Protein
Heading Accession and Version

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