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LOC106882804 charged multivesicular body protein 6-A [ Octopus bimaculoides (California two-spot octopus) ]

Gene ID: 106882804, updated on 23-Nov-2023

Summary

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Gene symbol
LOC106882804
Gene description
charged multivesicular body protein 6-A
Locus tag
OCBIM_22016507mg
See related
EnsemblRapid:LOC106882804
Gene type
protein coding
RefSeq status
MODEL
Organism
Octopus bimaculoides
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Cephalopoda; Coleoidea; Octopodiformes; Octopoda; Incirrata; Octopodidae; Octopus
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Genomic context

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See LOC106882804 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_01 current ASM119413v2 (GCF_001194135.2) 4 NC_068984.1 (23573893..23590928, complement)
100 previous assembly Octopus_bimaculoides_v2_0 (GCF_001194135.1) Unplaced Scaffold NW_014752432.1 (65396..81601)

Chromosome 4 - NC_068984.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106882809 Neighboring gene nodal homolog Neighboring gene uncharacterized LOC106882807 Neighboring gene nucleosome-remodeling factor subunit BPTF Neighboring gene aminoacyl tRNA synthase complex-interacting multifunctional protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in late endosome to vacuole transport via multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle budding from membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
charged multivesicular body protein 6-A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001194135.2-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM119413v2 Primary Assembly

Genomic

  1. NC_068984.1 Reference ASM119413v2 Primary Assembly

    Range
    23573893..23590928 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052967623.1 → XP_052823583.1  charged multivesicular body protein 6-A

    Related
    XP_052823583.1, XM_052967623.1
Nucleotide Protein
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