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RNU6-971P RNA, U6 small nuclear 971, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481926, updated on 17-Sep-2024

Summary

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Official Symbol
RNU6-971Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 971, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47934
See related
Ensembl:ENSG00000252729 AllianceGenome:HGNC:47934
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU6-971P in Genome Data Viewer
Location:
17q21.31
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (43473585..43473690)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (44326053..44326158)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (41550953..41551058)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene MIR2117 host gene Neighboring gene RNA, U6 small nuclear 406, pseudogene Neighboring gene microRNA 2117 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr17:41529855-41530629 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:41531211-41531710 Neighboring gene ribosomal protein L29 pseudogene 31 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:41561036-41561878 Neighboring gene U7 small nuclear RNA Neighboring gene DEAH-box helicase 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_042953.1 

    Range
    101..206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    43473585..43473690
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    44326053..44326158
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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