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LOC105627947 uncharacterized LOC105627947 [ Atta cephalotes ]

Gene ID: 105627947, updated on 1-Oct-2024

Summary

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Gene symbol
LOC105627947
Gene description
uncharacterized LOC105627947
Gene type
protein coding
RefSeq status
MODEL
Organism
Atta cephalotes
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta
Orthologs
honey bee all
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Genomic context

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See LOC105627947 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Attacep1.0 (GCF_000143395.1) Unplaced Scaffold NW_012130075.1 (1237604..1245500, complement)

NW_012130075.1Genomic Context describing neighboring genes Neighboring gene N-acetylgalactosamine kinase Neighboring gene extra-extra Neighboring gene uncharacterized LOC105627949 Neighboring gene Activating transcription factor-2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012130075.1 Unplaced Scaffold Reference Attacep1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC105627947

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Atta cephalotes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Attacep1.0

Genomic

  1. NW_012130075.1 Reference Attacep1.0

    Range
    1237604..1245500 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012209219.1 → XP_012064609.1  uncharacterized protein LOC105627947

    UniProtKB/TrEMBL
    A0A158P4A1
    Conserved Domains (3) summary
    smart00020
    Location:334 → 572
    Tryp_SPc; Trypsin-like serine protease
    cd00190
    Location:335 → 575
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    pfam01017
    Location:154 → 234
    STAT_alpha; STAT protein, all-alpha domain
Nucleotide Protein
Heading Accession and Version

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