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CATSPERD cation channel sperm associated auxiliary subunit delta [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105591896, updated on 13-Mar-2024

Summary

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Gene symbol
CATSPERD
Gene description
cation channel sperm associated auxiliary subunit delta
See related
Ensembl:ENSCATG00000039925
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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See CATSPERD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012001295.1 (5785740..5851097)

NW_012001295.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L36 Neighboring gene lon peptidase 1, mitochondrial Neighboring gene proline rich 22 Neighboring gene dihydrouridine synthase 3 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012001295.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in flagellated sperm motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sperm capacitation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CatSper complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sperm principal piece IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: cation channel sperm-associated protein subunit delta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012001295.1 Reference Caty_1.0

    Range
    5785740..5851097
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012073315.1 → XP_011928705.1  LOW QUALITY PROTEIN: cation channel sperm-associated protein subunit delta

    UniProtKB/TrEMBL
    A0A2K5N8Y2
    Related
    ENSCATP00000033952.1, ENSCATT00000058228.1
    Conserved Domains (1) summary
    pfam15020
    Location:72 → 786
    CATSPERD; Cation channel sperm-associated protein subunit delta
Nucleotide Protein
Heading Accession and Version

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