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UHRF1 ubiquitin like with PHD and ring finger domains 1 [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105591894, updated on 11-Apr-2024

Summary

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Gene symbol
UHRF1
Gene description
ubiquitin like with PHD and ring finger domains 1
See related
Ensembl:ENSCATG00000032110
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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See UHRF1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012001295.1 (4965378..5023536)

NW_012001295.1Genomic Context describing neighboring genes Neighboring gene perilipin 3 Neighboring gene arrestin domain containing 5 Neighboring gene lysine demethylase 4B Neighboring gene uncharacterized LOC105591825 Neighboring gene protein tyrosine phosphatase receptor type S Neighboring gene 60S ribosomal protein L32 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012001295.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of gene expression via chromosomal CpG island methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase UHRF1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012001295.1 Reference Caty_1.0

    Range
    4965378..5023536
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012073313.1 → XP_011928703.1  E3 ubiquitin-protein ligase UHRF1

    UniProtKB/TrEMBL
    A0A2K5LU35
    Related
    ENSCATP00000016456.1, ENSCATT00000040617.1
    Conserved Domains (6) summary
    cd01797
    Location:65 → 142
    NIRF_N; amino-terminal ubiquitin-like domain of Np95 and NIRF
    smart00213
    Location:67 → 138
    UBQ; Ubiquitin homologues
    cd00162
    Location:809 → 851
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    cd15616
    Location:383 → 429
    PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
    pfam02182
    Location:483 → 669
    SAD_SRA; SAD/SRA domain
    pfam12148
    Location:197 → 350
    TTD; Tandem tudor domain within UHRF1
Nucleotide Protein
Heading Accession and Version

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