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UST-AS2 UST antisense RNA 2 [ Homo sapiens (human) ]

Gene ID: 105378047, updated on 10-Dec-2024

Summary

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Official Symbol
UST-AS2provided by HGNC
Official Full Name
UST antisense RNA 2provided by HGNC
Primary source
HGNC:HGNC:40803
See related
AllianceGenome:HGNC:40803
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in adrenal (RPKM 1.0), lymph node (RPKM 0.4) and 8 other tissues See more
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Genomic context

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See UST-AS2 in Genome Data Viewer
Location:
6q25.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (149027229..149032661, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (150227033..150232463, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (149348365..149353797, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uronyl 2-sulfotransferase Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:149284708-149285284 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:149285285-149285861 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:149290736-149291326 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:149291327-149291917 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:149293308-149294306 Neighboring gene NANOG hESC enhancer GRCh37_chr6:149301302-149301803 Neighboring gene uncharacterized LOC124901424 Neighboring gene UST antisense RNA 1 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:149335755-149336309 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25240 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:149358711-149359296 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25241 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25242 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25243 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25244 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:149394281-149395480 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25245 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25246 Neighboring gene Sharpr-MPRA regulatory region 12512 Neighboring gene small nuclear ribonucleoprotein polypeptide B2 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17656 Neighboring gene uncharacterized LOC124901426 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25247

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_134599.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BX106536

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    149027229..149032661 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    150227033..150232463 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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