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LOC105377352 uncharacterized LOC105377352 [ Homo sapiens (human) ]

Gene ID: 105377352, updated on 10-Dec-2024

Summary

Gene symbol
LOC105377352
Gene description
uncharacterized LOC105377352
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LOC105377352 in Genome Data Viewer
Location:
4q24
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (105534787..105552284, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (108845591..108863082, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (106455944..106473441, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene PIMREG pseudogene 2 Neighboring gene ATP synthase F1 subunit epsilon pseudogene 1 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:106476385-106476934 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr4:106477486-106478035 Neighboring gene ARHGEF38 intronic transcript 1 Neighboring gene Rho guanine nucleotide exchange factor 38 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21782 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21783 Neighboring gene integrator complex subunit 12 Neighboring gene uncharacterized LOC124900748

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_188418.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC004066
  2. NR_188419.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC004066
  3. NR_188420.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC004066
  4. NR_188421.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC004066

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    105534787..105552284 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    108845591..108863082 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)