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LOC105376313 uncharacterized LOC105376313 [ Homo sapiens (human) ]

Gene ID: 105376313, updated on 22-Oct-2024

Summary

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Gene symbol
LOC105376313
Gene description
uncharacterized LOC105376313
See related
Ensembl:ENSG00000298953
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105376313 in Genome Data Viewer
Location:
9q34.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (134944726..134949027)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (147166399..147170700)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29290 Neighboring gene ficolin 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137820358-137821216 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137821217-137822074 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20482 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29291 Neighboring gene uncharacterized LOC105376314 Neighboring gene uncharacterized LOC124902302 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137874334-137874924 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137874925-137875513 Neighboring gene uncharacterized LOC124902303 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:137914415-137915055 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137921403-137921903 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137961741-137962638 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:137977814-137978674 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:137978675-137979535 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137980170-137980974 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137980975-137981778 Neighboring gene ReSE screen-validated silencer GRCh37_chr9:137983799-137983956 Neighboring gene olfactomedin 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137989975-137990476 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137997243-137997767 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137997768-137998293 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137998819-137999344 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:138000081-138000642 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:138000643-138001202 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:138007797-138008496

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    134944726..134949027
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_930421.3 RNA Sequence

    Related
    ENST00000759312.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    147166399..147170700
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007080109.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials