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LOC105376166 uncharacterized LOC105376166 [ Homo sapiens (human) ]

Gene ID: 105376166, updated on 10-Dec-2024

Summary

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Gene symbol
LOC105376166
Gene description
uncharacterized LOC105376166
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105376166 in Genome Data Viewer
Location:
9q22.33
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (97124299..97130679, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (109295048..109302449, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107987104 Neighboring gene vomeronasal 1 receptor 51 pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:99870099-99870599 Neighboring gene putative protein FAM220BP Neighboring gene uncharacterized LOC112268050 Neighboring gene Sharpr-MPRA regulatory region 737 Neighboring gene ankyrin repeat domain 18C, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28656 Neighboring gene RNA, U6 small nuclear 798, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. Ota T, et al. Nat Genet, 2004 Jan. PMID 14702039

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    97124299..97130679 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_930154.3 RNA Sequence

  2. XR_007061683.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    109295048..109302449 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007079786.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials