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LOC105375999 uncharacterized LOC105375999 [ Homo sapiens (human) ]

Gene ID: 105375999, updated on 10-Dec-2024

Summary

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Gene symbol
LOC105375999
Gene description
uncharacterized LOC105375999
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105375999 in Genome Data Viewer
Location:
9p21.2
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (26346170..26501658, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (26357124..26512609, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 3106 Neighboring gene uncharacterized LOC107987027 Neighboring gene Sharpr-MPRA regulatory region 5633 Neighboring gene uncharacterized LOC124902133 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:26636976-26637607 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19817 Neighboring gene uncharacterized LOC105369289

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    26346170..26501658 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001746566.2 RNA Sequence

  2. XR_001746565.1 RNA Sequence

  3. XR_001746567.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    26357124..26512609 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007080232.1 RNA Sequence

  2. XR_007080233.1 RNA Sequence

  3. XR_007080234.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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