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LOC105375008 uncharacterized LOC105375008 [ Homo sapiens (human) ]

Gene ID: 105375008, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105375008
Gene description
uncharacterized LOC105375008
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105375008 in Genome Data Viewer
Location:
6p22.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (29475699..29490181)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (29350356..29364838)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105379641 Neighboring gene olfactory receptor family 2 subfamily H member 1 Neighboring gene ubiquitin D pseudogene 1 Neighboring gene MAS1L pseudogene 1 Neighboring gene uncharacterized LOC124901486 Neighboring gene MAS1 proto-oncogene like, G protein-coupled receptor Neighboring gene ribosomal protein S17 pseudogene 1 Neighboring gene long intergenic non-protein coding RNA 2829 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:29492704-29493211 Neighboring gene long intergenic non-protein coding RNA 1015

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    29475699..29490181
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007059916.1 RNA Sequence

  2. XR_007059915.1 RNA Sequence

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_167244.2 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    741360..755843
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007068568.1 RNA Sequence

  2. XR_007068567.1 RNA Sequence

Reference GRCh38.p14 ALT_REF_LOCI_2

Genomic

  1. NT_113891.3 Reference GRCh38.p14 ALT_REF_LOCI_2

    Range
    962151..976633
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007068747.1 RNA Sequence

  2. XR_007068746.1 RNA Sequence

Reference GRCh38.p14 ALT_REF_LOCI_3

Genomic

  1. NT_167245.2 Reference GRCh38.p14 ALT_REF_LOCI_3

    Range
    741222..755704
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007068816.1 RNA Sequence

  2. XR_007068815.1 RNA Sequence

Reference GRCh38.p14 ALT_REF_LOCI_4

Genomic

  1. NT_167246.2 Reference GRCh38.p14 ALT_REF_LOCI_4

    Range
    740824..755307
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007068839.1 RNA Sequence

  2. XR_007068838.1 RNA Sequence

Reference GRCh38.p14 ALT_REF_LOCI_5

Genomic

  1. NT_167247.2 Reference GRCh38.p14 ALT_REF_LOCI_5

    Range
    741073..755555
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007068857.1 RNA Sequence

  2. XR_007068856.1 RNA Sequence

Reference GRCh38.p14 ALT_REF_LOCI_6

Genomic

  1. NT_167248.2 Reference GRCh38.p14 ALT_REF_LOCI_6

    Range
    741165..755648
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007068870.1 RNA Sequence

  2. XR_007068869.1 RNA Sequence

Reference GRCh38.p14 ALT_REF_LOCI_7

Genomic

  1. NT_167249.2 Reference GRCh38.p14 ALT_REF_LOCI_7

    Range
    784710..799192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007068887.1 RNA Sequence

  2. XR_007068886.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    29350356..29364838
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007076689.1 RNA Sequence

  2. XR_007076688.1 RNA Sequence

Nucleotide Protein
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