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LOC105373487 uncharacterized LOC105373487 [ Homo sapiens (human) ]

Gene ID: 105373487, updated on 22-Oct-2024

Summary

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Gene symbol
LOC105373487
Gene description
uncharacterized LOC105373487
See related
Ensembl:ENSG00000298685
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 1.1) See more
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Genomic context

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See LOC105373487 in Genome Data Viewer
Location:
2q11.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (94947592..94962426)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (95454092..95468927)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC442028 Neighboring gene MT-CO3 pseudogene 45 Neighboring gene ribosomal protein S24 pseudogene 6 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:95609034-95609219 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:95660342-95660890 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:95660891-95661438 Neighboring gene RNA, 7SL, cytoplasmic 575, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16180 Neighboring gene MAL antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:95687830-95688330 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11737 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:95691837-95692560 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:95697485-95698400 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11738 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:95709333-95709988 Neighboring gene uncharacterized LOC124906047 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:95713447-95713986 Neighboring gene mal, T cell differentiation protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    94947592..94962426
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_923074.3 RNA Sequence

  2. XR_007087135.1 RNA Sequence

  3. XR_923075.3 RNA Sequence

    Related
    ENST00000757284.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    95454092..95468927
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007072295.1 RNA Sequence

  2. XR_007072296.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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