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LOC105373299 uncharacterized LOC105373299 [ Homo sapiens (human) ]

Gene ID: 105373299, updated on 22-Oct-2024

Summary

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Gene symbol
LOC105373299
Gene description
uncharacterized LOC105373299
See related
Ensembl:ENSG00000286794
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in brain (RPKM 3.7), testis (RPKM 2.1) and 3 other tissues See more
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Genomic context

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See LOC105373299 in Genome Data Viewer
Location:
Xq22.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (102141728..102143965)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (100586312..100588555)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene MT-ND6 pseudogene 13 Neighboring gene transcription elongation factor A like 2 Neighboring gene transcription elongation factor A like 6 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29813 Neighboring gene brain expressed X-linked 5 Neighboring gene t-complex 11 family, X-linked 3, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    102141728..102143965
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007068283.1 RNA Sequence

    Related
    ENST00000828775.1

  2. XR_007068282.1 RNA Sequence

    Related
    ENST00000828779.1

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791816.1 Reference GRCh38.p14 PATCHES

    Range
    36818..39061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_938472.4 RNA Sequence

  2. XR_938471.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    100586312..100588555
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007090954.1 RNA Sequence

  2. XR_007090953.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Research Materials