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LOC105371750 uncharacterized LOC105371750 [ Homo sapiens (human) ]

Gene ID: 105371750, updated on 10-Dec-2024

Summary

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Gene symbol
LOC105371750
Gene description
uncharacterized LOC105371750
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105371750 in Genome Data Viewer
Location:
17q12
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (36657894..36773446)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (37643826..37736064)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107985031 Neighboring gene dehydrogenase/reductase 11 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:34983260-34983760 Neighboring gene mitochondrial rRNA methyltransferase 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:34998295-34999169 Neighboring gene MPRA-validated peak2825 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:35010359-35010858 Neighboring gene VISTA enhancer hs362 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:35013913-35014450 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:35018784-35018989 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:35021739-35022238 Neighboring gene uncharacterized LOC105371751 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:35109266-35109439 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:35148027-35148528 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:35169882-35170594 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:35170595-35171307 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:35173923-35174428 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:35174429-35174934 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:35183956-35184456 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:35184457-35184957 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:35194089-35194756 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr17:35207061-35208260 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:35215835-35216366 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:35219226-35220198 Neighboring gene Sharpr-MPRA regulatory region 13221 Neighboring gene LHX1 divergent transcript Neighboring gene Sharpr-MPRA regulatory region 9746 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:35275423-35275942 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:35275943-35276460 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr17:35278241-35279440 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:35289047-35289564 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:35289565-35290082 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:35290165-35291080 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:35292909-35293822 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:35294081-35294922 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:35295765-35296606 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:35298089-35298612 Neighboring gene LIM homeobox 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    36657894..36773446
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007065730.1 RNA Sequence

  2. XR_002958156.2 RNA Sequence

  3. XR_001752870.2 RNA Sequence

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187614.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    968511..985195
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001756386.2 RNA Sequence

  2. XR_001756385.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    37643826..37736064
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007087427.1 RNA Sequence

  2. XR_007087429.1 RNA Sequence

  3. XR_007087430.1 RNA Sequence

  4. XR_007087428.1 RNA Sequence

Nucleotide Protein
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