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LOC105371569 uncharacterized LOC105371569 [ Homo sapiens (human) ]

Gene ID: 105371569, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105371569
Gene description
uncharacterized LOC105371569
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105371569 in Genome Data Viewer
Location:
17p11.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (18442208..18448764, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (18389042..18395594, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene keratin 17 pseudogene 2 Neighboring gene uncharacterized LOC105371570 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:18341877-18342526 Neighboring gene keratin 16 pseudogene 1 Neighboring gene keratin 16 pseudogene 4 Neighboring gene transportin 1 pseudogene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    18442208..18448764 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_934296.3 RNA Sequence

  2. XR_007065653.1 RNA Sequence

  3. XR_934297.2 RNA Sequence

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_017363819.1 Reference GRCh38.p14 PATCHES

    Range
    212187..218743 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002959079.2 RNA Sequence

  2. XR_007069023.1 RNA Sequence

  3. XR_002959081.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    18389042..18395594 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007087644.1 RNA Sequence

  2. XR_007087643.1 RNA Sequence

  3. XR_007087642.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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