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LOC105370798 uncharacterized LOC105370798 [ Homo sapiens (human) ]

Gene ID: 105370798, updated on 10-Dec-2024

Summary

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Gene symbol
LOC105370798
Gene description
uncharacterized LOC105370798
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105370798 in Genome Data Viewer
Location:
15q21.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (44854557..44856774)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (42662567..42664784)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:45021095-45022080 Neighboring gene ring finger protein 4B, pseudogene Neighboring gene tripartite motif containing 69 Neighboring gene Sharpr-MPRA regulatory region 4328 Neighboring gene ReSE screen-validated silencer GRCh37_chr15:45084988-45085176 Neighboring gene ReSE screen-validated silencer GRCh37_chr15:45098626-45098830 Neighboring gene Sharpr-MPRA regulatory region 4183 Neighboring gene sorbitol dehydrogenase 2, pseudogene Neighboring gene RNA, U1 small nuclear 119, pseudogene Neighboring gene telomere repeat binding bouquet formation protein 2 pseudogene Neighboring gene 5-azacytidine induced 2 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    44854557..44856774
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_932185.3 RNA Sequence

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187605.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    178889..181107
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_951894.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    42662567..42664784
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007085923.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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