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Gm42288 predicted gene, 42288 [ Mus musculus (house mouse) ]

Gene ID: 105247133, updated on 22-Oct-2024

Summary

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Official Symbol
Gm42288provided by MGI
Official Full Name
predicted gene, 42288provided by MGI
Primary source
MGI:MGI:5625173
See related
Ensembl:ENSMUSG00000123644 AllianceGenome:MGI:5625173
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward heart adult (RPKM 1.9) See more
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Genomic context

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See Gm42288 in Genome Data Viewer
Location:
4 B1; 4
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (50788227..50827001, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (50788227..50827001, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene glutamate receptor ionotropic, NMDA3A Neighboring gene protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type II) Neighboring gene STARR-seq mESC enhancer starr_10189 Neighboring gene STARR-seq mESC enhancer starr_10190 Neighboring gene predicted gene, 25485 Neighboring gene STARR-seq mESC enhancer starr_10191 Neighboring gene STARR-seq mESC enhancer starr_10192 Neighboring gene STARR-seq mESC enhancer starr_10193 Neighboring gene STARR-seq mESC enhancer starr_10194 Neighboring gene predicted gene, 42287 Neighboring gene STARR-seq mESC enhancer starr_10195 Neighboring gene STARR-seq mESC enhancer starr_10196 Neighboring gene predicted gene 12460 Neighboring gene cylicin, basic protein of sperm head cytoskeleton 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    50788227..50827001 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_881276.1 RNA Sequence

    Related
    ENSMUST00000259344.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials