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Gm42271 predicted gene, 42271 [ Mus musculus (house mouse) ]

Gene ID: 105247113, updated on 17-Aug-2024

Summary

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Official Symbol
Gm42271provided by MGI
Official Full Name
predicted gene, 42271provided by MGI
Primary source
MGI:MGI:5625156
See related
AllianceGenome:MGI:5625156
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm42271 in Genome Data Viewer
Location:
4 A5; 4
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (39495705..39508994, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (39495705..39508994, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene 17094 Neighboring gene RIKEN cDNA 1700009N14 gene Neighboring gene STARR-seq mESC enhancer starr_09974 Neighboring gene STARR-seq mESC enhancer starr_09975 Neighboring gene STARR-seq mESC enhancer starr_09976 Neighboring gene STARR-seq mESC enhancer starr_09977 Neighboring gene STARR-seq mESC enhancer starr_09978 Neighboring gene STARR-seq mESC enhancer starr_09979 Neighboring gene predicted gene, 34007 Neighboring gene ribosomal protein L7A pseudogene Neighboring gene predicted gene, 34071

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    39495705..39508994 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_881186.1 RNA Sequence

  2. XR_881185.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials