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Gm40773 predicted gene, 40773 [ Mus musculus (house mouse) ]

Gene ID: 105245298, updated on 17-Aug-2024

Summary

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Official Symbol
Gm40773provided by MGI
Official Full Name
predicted gene, 40773provided by MGI
Primary source
MGI:MGI:5623658
See related
AllianceGenome:MGI:5623658
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in testis adult (RPKM 2.1), lung adult (RPKM 0.7) and 4 other tissues See more
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Genomic context

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See Gm40773 in Genome Data Viewer
Location:
10 D2; 10
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (117698114..117702830)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (117862209..117867939)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene CapStarr-seq enhancer MGSCv37_chr10:117192156-117192497 Neighboring gene nucleoporin 107 Neighboring gene CapStarr-seq enhancer MGSCv37_chr10:117229949-117230058 Neighboring gene CapStarr-seq enhancer MGSCv37_chr10:117235617-117235851 Neighboring gene STARR-seq mESC enhancer starr_28002 Neighboring gene STARR-positive B cell enhancer ABC_E10647 Neighboring gene RAS related protein 1b Neighboring gene STARR-positive B cell enhancer mm9_chr10:117273422-117273722 Neighboring gene STARR-positive B cell enhancer ABC_E9807 Neighboring gene predicted gene, 53637 Neighboring gene CapStarr-seq enhancer MGSCv37_chr10:117298174-117298357 Neighboring gene predicted gene, 32552 Neighboring gene predicted gene, 32605 Neighboring gene STARR-positive B cell enhancer mm9_chr10:117346931-117347231 Neighboring gene STARR-positive B cell enhancer mm9_chr10:117347418-117347719 Neighboring gene RIKEN cDNA 4933411E08 gene Neighboring gene CapStarr-seq enhancer MGSCv37_chr10:117385054-117385237

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Post-entrapment genome engineering: first exon size does not affect the expression of fusion transcripts generated by gene entrapment. Osipovich AB, et al. Genome Res, 2005 Mar. PMID 15741512, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    117698114..117702830
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_003948950.2 RNA Sequence

  2. XR_872071.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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