U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Gm39920 predicted gene, 39920 [ Mus musculus (house mouse) ]

Gene ID: 105244280, updated on 22-Oct-2024

Summary

Go to the top of the page Help
Official Symbol
Gm39920provided by MGI
Official Full Name
predicted gene, 39920provided by MGI
Primary source
MGI:MGI:5622805
See related
Ensembl:ENSMUSG00000130839 AllianceGenome:MGI:5622805
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Gm39920 in Genome Data Viewer
Location:
2 F1; 2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (124572306..124635885, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (124730386..124793965, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D Neighboring gene RIKEN cDNA 4930583P06 gene Neighboring gene STARR-seq mESC enhancer starr_05573 Neighboring gene STARR-seq mESC enhancer starr_05574 Neighboring gene STARR-seq mESC enhancer starr_05575 Neighboring gene STARR-seq mESC enhancer starr_05576 Neighboring gene STARR-positive B cell enhancer ABC_E5974 Neighboring gene predicted gene, 54148 Neighboring gene predicted gene, 34484 Neighboring gene predicted gene, 52495 Neighboring gene STARR-seq mESC enhancer starr_05578 Neighboring gene STARR-seq mESC enhancer starr_05579 Neighboring gene STARR-seq mESC enhancer starr_05581 Neighboring gene solute carrier family 24, member 5 Neighboring gene myelin basic protein expression factor 2, repressor

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    124572306..124635885 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_003953898.1 RNA Sequence

  2. XR_866694.2 RNA Sequence

    Related
    ENSMUST00000302236.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Research Materials