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Gm39443 predicted gene, 39443 [ Mus musculus (house mouse) ]

Gene ID: 105243554, updated on 17-Aug-2024

Summary

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Official Symbol
Gm39443provided by MGI
Official Full Name
predicted gene, 39443provided by MGI
Primary source
MGI:MGI:5622328
See related
AllianceGenome:MGI:5622328
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm39443 in Genome Data Viewer
Location:
11 E1; 11
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (109544794..109547619)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (109653968..109656793)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E7089 Neighboring gene predicted gene, 39442 Neighboring gene WD repeat domain, phosphoinositide interacting 1 Neighboring gene STARR-positive B cell enhancer ABC_E259 Neighboring gene STARR-positive B cell enhancer ABC_E11498 Neighboring gene predicted gene 11685 Neighboring gene STARR-seq mESC enhancer starr_31024 Neighboring gene STARR-positive B cell enhancer ABC_E7090 Neighboring gene protein kinase, cAMP dependent regulatory, type I, alpha Neighboring gene STARR-positive B cell enhancer mm9_chr11:109531775-109532076 Neighboring gene STARR-positive B cell enhancer mm9_chr11:109533241-109533541 Neighboring gene FAM20A, golgi associated secretory pathway pseudokinase Neighboring gene uncharacterized LOC105243553 Neighboring gene STARR-seq mESC enhancer starr_31027 Neighboring gene STARR-seq mESC enhancer starr_31028 Neighboring gene STARR-seq mESC enhancer starr_31029 Neighboring gene predicted gene, 42093

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    109544794..109547619
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_880285.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials