U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Gm39079 predicted gene, 39079 [ Mus musculus (house mouse) ]

Gene ID: 105243043, updated on 17-Aug-2024

Summary

Official Symbol
Gm39079provided by MGI
Official Full Name
predicted gene, 39079provided by MGI
Primary source
MGI:MGI:5621964
See related
Ensembl:ENSMUSG00000109093 AllianceGenome:MGI:5621964
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm19950
Expression
Restricted expression toward kidney adult (RPKM 31.3) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Gm39079 in Genome Data Viewer
Location:
7 F2; 7
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (119206903..119241666, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (119610154..119620331, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene acyl-CoA synthetase medium-chain family member 2 Neighboring gene predicted gene, 39078 Neighboring gene acyl-CoA synthetase medium-chain family member 1 Neighboring gene STARR-seq mESC enhancer starr_20036 Neighboring gene acyl-CoA synthetase medium-chain family member 4 Neighboring gene THUMP domain containing 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_166607.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC134587
  2. NR_188160.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC134587
    Related
    ENSMUST00000208167.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    119206903..119241666 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)