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Gm38778 predicted gene, 38778 [ Mus musculus (house mouse) ]

Gene ID: 105242610, updated on 17-Aug-2024

Summary

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Official Symbol
Gm38778provided by MGI
Official Full Name
predicted gene, 38778provided by MGI
Primary source
MGI:MGI:5621663
See related
AllianceGenome:MGI:5621663
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in testis adult (RPKM 2.5), ovary adult (RPKM 0.6) and 12 other tissues See more
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Genomic context

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See Gm38778 in Genome Data Viewer
Location:
6 A3.1; 6
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (27205018..27218475)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (27205019..27218476)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 24691 Neighboring gene STARR-seq mESC enhancer starr_15386 Neighboring gene STARR-seq mESC enhancer starr_15387 Neighboring gene STARR-seq mESC enhancer starr_15388 Neighboring gene STARR-seq mESC enhancer starr_15389 Neighboring gene STARR-seq mESC enhancer starr_15390 Neighboring gene predicted gene, 30779 Neighboring gene STARR-seq mESC enhancer starr_15392 Neighboring gene STARR-seq mESC enhancer starr_15393 Neighboring gene STARR-seq mESC enhancer starr_15396 Neighboring gene STARR-seq mESC enhancer starr_15397 Neighboring gene STARR-seq mESC enhancer starr_15399 Neighboring gene STARR-seq mESC enhancer starr_15400 Neighboring gene STARR-seq mESC enhancer starr_15401 Neighboring gene glutamate receptor, metabotropic 8 Neighboring gene STARR-seq mESC enhancer starr_15402 Neighboring gene STARR-seq mESC enhancer starr_15403 Neighboring gene predicted gene, 26310 Neighboring gene microRNA 592

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    27205018..27218475
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_868825.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials