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Gm38709 predicted gene, 38709 [ Mus musculus (house mouse) ]

Gene ID: 105242444, updated on 17-Aug-2024

Summary

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Official Symbol
Gm38709provided by MGI
Official Full Name
predicted gene, 38709provided by MGI
Primary source
MGI:MGI:5621594
See related
AllianceGenome:MGI:5621594
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm38709 in Genome Data Viewer
Location:
4 C5; 4
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (97638884..97665341, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (97750647..97777423, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA E130114P18 gene Neighboring gene STARR-seq mESC enhancer starr_10836 Neighboring gene nuclear factor I/A Neighboring gene STARR-seq mESC enhancer starr_10837 Neighboring gene predicted gene, 54242 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:97417857-97418058 Neighboring gene STARR-positive B cell enhancer ABC_E1033 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:97439041-97439228 Neighboring gene STARR-positive B cell enhancer ABC_E339 Neighboring gene STARR-seq mESC enhancer starr_10839 Neighboring gene STARR-seq mESC enhancer starr_10840 Neighboring gene predicted gene, 19417 Neighboring gene predicted gene, 40208

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    97638884..97665341 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004942129.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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