U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MIOX myo-inositol oxygenase [ Eucalyptus grandis ]

Gene ID: 104436537, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
MIOX
Gene description
myo-inositol oxygenase
Locus tag
EUGRSUZ_C00949
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See MIOX in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 3 NC_052614.1 (11229172..11231700)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092440.1 (14761553..14764038)

Chromosome 3 - NC_052614.1Genomic Context describing neighboring genes Neighboring gene transcription factor MYB87 Neighboring gene zinc finger CCCH domain-containing protein 20 Neighboring gene glutathione hydrolase 3-like Neighboring gene AP-4 complex subunit sigma

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol oxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in inositol catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
inositol oxygenase
Names
inositol oxygenase 2
NP_001289646.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001302717.1 → NP_001289646.1  inositol oxygenase

    See identical proteins and their annotated locations for NP_001289646.1

    Status: PROVISIONAL

    Source sequence(s)
    EU737109
    UniProtKB/TrEMBL
    B3VDZ0
    Conserved Domains (1) summary
    pfam05153
    Location:65 → 315
    MIOX; Myo-inositol oxygenase

RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052614.1 Reference ASM1654582v1 Primary Assembly

    Range
    11229172..11231700
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.