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ISU1 iron-sulfur cluster assembly protein 1-like [ Eucalyptus grandis ]

Gene ID: 104418091, updated on 7-Dec-2023

Summary

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Gene symbol
ISU1
Gene description
iron-sulfur cluster assembly protein 1-like
Locus tag
EUGRSUZ_B00303
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See ISU1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 2 NC_052613.1 (3272908..3275532)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092439.1 (4374652..4377258)

Chromosome 2 - NC_052613.1Genomic Context describing neighboring genes Neighboring gene transcription factor MYB98 Neighboring gene boron transporter 1 Neighboring gene uncharacterized LOC104418101 Neighboring gene probable inactive poly [ADP-ribose] polymerase SRO5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2 iron, 2 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferrous iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in iron-sulfur cluster assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
iron-sulfur cluster assembly protein 1-like
Names
iron-sulfer cluster scaffold protein ISU1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001302712.1 → NP_001289641.1  iron-sulfur cluster assembly protein 1-like

    See identical proteins and their annotated locations for NP_001289641.1

    Status: PROVISIONAL

    Source sequence(s)
    EU770570
    UniProtKB/TrEMBL
    A0A059CZJ4, B8R1J5
    Conserved Domains (1) summary
    PRK11325
    Location:29 → 154
    PRK11325; scaffold protein; Provisional

RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052613.1 Reference ASM1654582v1 Primary Assembly

    Range
    3272908..3275532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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