U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

si:ch1073-456m8.1 si:ch1073-456m8.1 [ Danio rerio (zebrafish) ]

Gene ID: 103911796, updated on 9-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
si:ch1073-456m8.1provided by ZNC
Official Full Name
si:ch1073-456m8.1provided by ZNC
Primary source
ZFIN:ZDB-GENE-160114-79
See related
AllianceGenome:ZFIN:ZDB-GENE-160114-79
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to act upstream of or within regulation of DNA-templated transcription. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See si:ch1073-456m8.1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (185329..194775, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (222894..232353, complement)

Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene testis enhanced gene transcript (BAX inhibitor 1) Neighboring gene advillin Neighboring gene dual specificity phosphatase 7 Neighboring gene POC1 centriolar protein A Neighboring gene aminolevulinate, delta-, synthase 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by ZFIN

Process Evidence Code Pubs
acts_upstream_of_or_within regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
leucine-rich repeat flightless-interacting protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007122.7 Reference GRCz11 Primary Assembly

    Range
    185329..194775 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009305713.3 → XP_009303988.1  leucine-rich repeat flightless-interacting protein 2

    UniProtKB/TrEMBL
    A0A8M3AX92
    Conserved Domains (1) summary
    pfam09738
    Location:84 → 139
    DUF2051; Double stranded RNA binding protein (DUF2051)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials