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TTLL1 TTL family tubulin polyglutamylase complex subunit L1 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102936953, updated on 10-Mar-2024

Summary

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Gene symbol
TTLL1
Gene description
TTL family tubulin polyglutamylase complex subunit L1
Locus tag
UY3_08868
See related
EnsemblRapid:ENSCMYG00015014683
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See TTLL1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 1 NC_057849.1 (227355742..227392691)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 1 NC_051241.1 (227355753..227396750)

Chromosome 1 - NC_057849.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102936721 Neighboring gene malonyl-CoA-acyl carrier protein transacylase Neighboring gene protein kinase C and casein kinase substrate in neurons 2 Neighboring gene ARF GTPase activating protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tubulin-glutamic acid ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyglutamylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable tubulin polyglutamylase TTLL1
Names
Putative tubulin polyglutamylase TTLL1
tubulin tyrosine ligase like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057849.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    227355742..227392691
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037914986.2 → XP_037770914.1  probable tubulin polyglutamylase TTLL1 isoform X3

    Conserved Domains (1) summary
    pfam03133
    Location:70 → 339
    TTL; Tubulin-tyrosine ligase family

  2. XM_037914996.2 → XP_037770924.1  probable tubulin polyglutamylase TTLL1 isoform X4

    Conserved Domains (1) summary
    pfam03133
    Location:70 → 330
    TTL; Tubulin-tyrosine ligase family

  3. XM_037914983.2 → XP_037770911.1  probable tubulin polyglutamylase TTLL1 isoform X1

    Related
    ENSCMYP00015022665.1, ENSCMYT00015027629.1
    Conserved Domains (1) summary
    pfam03133
    Location:70 → 375
    TTL; Tubulin-tyrosine ligase family

  4. XM_037914984.2 → XP_037770912.1  probable tubulin polyglutamylase TTLL1 isoform X1

    Related
    ENSCMYP00015022663.1, ENSCMYT00015027627.1
    Conserved Domains (1) summary
    pfam03133
    Location:70 → 375
    TTL; Tubulin-tyrosine ligase family

  5. XM_037914985.2 → XP_037770913.1  probable tubulin polyglutamylase TTLL1 isoform X2

    Related
    ENSCMYP00015022657.1, ENSCMYT00015027621.1
    Conserved Domains (1) summary
    pfam03133
    Location:59 → 364
    TTL; Tubulin-tyrosine ligase family

  6. XM_037915028.2 → XP_037770956.1  probable tubulin polyglutamylase TTLL1 isoform X5

    Conserved Domains (1) summary
    pfam03133
    Location:21 → 326
    TTL; Tubulin-tyrosine ligase family

  7. XM_037915018.2 → XP_037770946.1  probable tubulin polyglutamylase TTLL1 isoform X5

    Conserved Domains (1) summary
    pfam03133
    Location:21 → 326
    TTL; Tubulin-tyrosine ligase family

  8. XM_037915007.2 → XP_037770935.1  probable tubulin polyglutamylase TTLL1 isoform X5

    Related
    ENSCMYP00015022649.1, ENSCMYT00015027609.1
    Conserved Domains (1) summary
    pfam03133
    Location:21 → 326
    TTL; Tubulin-tyrosine ligase family
Nucleotide Protein
Heading Accession and Version

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